Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm12029-201ENSMUST00000120073 832 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm12291-201ENSMUST00000121627 311 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm10051-201ENSMUST00000145209 414 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm21156-201ENSMUST00000189693 869 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 AY036118-201ENSMUST00000200021 923 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ptcd1Q8C2E4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm9540-201ENSMUST00000188230 478 ntBASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm19187-201ENSMUST00000206781 892 ntBASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ptcd1Q8C2E4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Mir6958-201ENSMUST00000184207 73 ntBASIC15.38■□□□□ 0.05
Ptcd1Q8C2E4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms