Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cacna1eQ61290 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cacna1eQ61290 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.19□□□□□ -0.46
Cacna1eQ61290 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.19□□□□□ -0.46
Cacna1eQ61290 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cacna1eQ61290 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm6485-201ENSMUST00000160676 439 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm17831-201ENSMUST00000205579 900 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Mir7677-201ENSMUST00000184226 67 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.18□□□□□ -0.46
Cacna1eQ61290 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cacna1eQ61290 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.17□□□□□ -0.46
Cacna1eQ61290 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cacna1eQ61290 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cacna1eQ61290 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms