Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Gm23045-201ENSMUST00000175041 96 ntBASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Gm28388-201ENSMUST00000186262 437 ntBASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Gm44329-201ENSMUST00000197469 112 ntBASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Arhgef40Q3UPH7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm24844-201ENSMUST00000158679 127 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 AC134860.1-201ENSMUST00000224867 660 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm22920-201ENSMUST00000102175 109 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm25076-201ENSMUST00000104098 132 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm13916-201ENSMUST00000117368 628 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm14585-201ENSMUST00000120713 634 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm11836-201ENSMUST00000121022 441 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm12407-201ENSMUST00000180219 324 ntBASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Arhgef40Q3UPH7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Arhgef40Q3UPH7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Gm14314-201ENSMUST00000118225 1015 ntBASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Gm12628-201ENSMUST00000122193 382 ntBASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Gm3793-201ENSMUST00000204973 672 ntBASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms