Protein–RNA interactions for Protein: P97452

Bop1, Ribosome biogenesis protein BOP1, mousemouse

Known RBP Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bop1P97452 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Bop1P97452 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gm8213-201ENSMUST00000118191 441 ntBASIC12.28□□□□□ -0.44
Bop1P97452 Gm16177-201ENSMUST00000120728 718 ntBASIC12.28□□□□□ -0.44
Bop1P97452 Gm27331-201ENSMUST00000183705 60 ntBASIC12.28□□□□□ -0.44
Bop1P97452 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.28□□□□□ -0.44
Bop1P97452 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.28□□□□□ -0.44
Bop1P97452 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.28□□□□□ -0.44
Bop1P97452 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Bop1P97452 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Bop1P97452 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Bop1P97452 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.28□□□□□ -0.44
Bop1P97452 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.27□□□□□ -0.44
Bop1P97452 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Bop1P97452 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Bop1P97452 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Bop1P97452 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.27□□□□□ -0.44
Bop1P97452 Gm13392-201ENSMUST00000117708 150 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Gm12203-201ENSMUST00000118235 598 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Gm12209-201ENSMUST00000120089 596 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.27□□□□□ -0.45
Bop1P97452 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Bop1P97452 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Gm43818-201ENSMUST00000200605 466 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Gm6007-201ENSMUST00000208170 823 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
Bop1P97452 Gm29705-201ENSMUST00000212598 474 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.27□□□□□ -0.45
Bop1P97452 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Gm26035-201ENSMUST00000083065 308 ntBASIC12.27□□□□□ -0.45
Bop1P97452 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Bop1P97452 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.27□□□□□ -0.45
Bop1P97452 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.27□□□□□ -0.45
Bop1P97452 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.27□□□□□ -0.45
Bop1P97452 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Bop1P97452 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Gm12384-201ENSMUST00000119228 919 ntBASIC12.26□□□□□ -0.45
Bop1P97452 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.26□□□□□ -0.45
Bop1P97452 Gm35960-201ENSMUST00000202712 767 ntBASIC12.26□□□□□ -0.45
Bop1P97452 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.26□□□□□ -0.45
Bop1P97452 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.26□□□□□ -0.45
Bop1P97452 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Bop1P97452 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms