Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Mir7686-201ENSMUST00000200604 57 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm9797-202ENSMUST00000218003 294 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Gm36991-201ENSMUST00000191800 648 ntBASIC15.61■□□□□ 0.09
Nkx2-3P97334 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-3P97334 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm15131-201ENSMUST00000119124 595 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm8343-201ENSMUST00000182705 994 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm27438-201ENSMUST00000183480 110 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm44545-201ENSMUST00000208262 746 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.6■□□□□ 0.09
Nkx2-3P97334 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.6■□□□□ 0.09
Nkx2-3P97334 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.59■□□□□ 0.09
Nkx2-3P97334 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms