Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.69□□□□□ -0.38
Vps4bP46467 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.69□□□□□ -0.38
Vps4bP46467 Gm27847-201ENSMUST00000183711 107 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Gm27375-201ENSMUST00000183799 107 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.69□□□□□ -0.38
Vps4bP46467 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps4bP46467 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps4bP46467 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps4bP46467 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps4bP46467 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Vps4bP46467 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Vps4bP46467 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.68□□□□□ -0.38
Vps4bP46467 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.68□□□□□ -0.38
Vps4bP46467 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps4bP46467 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps4bP46467 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps4bP46467 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vps4bP46467 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vps4bP46467 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm24231-201ENSMUST00000104315 133 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Gm13226-201ENSMUST00000117838 404 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vps4bP46467 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm27390-201ENSMUST00000184516 176 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Gm45784-201ENSMUST00000188360 142 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps4bP46467 Gm32025-201ENSMUST00000217960 307 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vps4bP46467 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps4bP46467 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps4bP46467 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms