Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm14921-201ENSMUST00000118643 908 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.59□□□□□ -0.55
Hoxc5P32043 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxc5P32043 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Hoxc5P32043 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.59□□□□□ -0.55
Hoxc5P32043 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxc5P32043 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.58□□□□□ -0.55
Hoxc5P32043 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxc5P32043 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.58□□□□□ -0.56
Hoxc5P32043 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Gm11478-201ENSMUST00000117851 599 ntBASIC11.58□□□□□ -0.56
Hoxc5P32043 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Gm29649-201ENSMUST00000185649 419 ntBASIC11.58□□□□□ -0.56
Hoxc5P32043 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.58□□□□□ -0.56
Hoxc5P32043 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Hoxc5P32043 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.58□□□□□ -0.56
Hoxc5P32043 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxc5P32043 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxc5P32043 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc5P32043 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxc5P32043 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxc5P32043 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms