Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Gm8805-201ENSMUST00000117848 313 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.74□□□□□ -0.53
Clk1P22518 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.74□□□□□ -0.53
Clk1P22518 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.74□□□□□ -0.53
Clk1P22518 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.74□□□□□ -0.53
Clk1P22518 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.74□□□□□ -0.53
Clk1P22518 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Clk1P22518 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.74□□□□□ -0.53
Clk1P22518 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clk1P22518 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.73□□□□□ -0.53
Clk1P22518 Gm4984-201ENSMUST00000115987 360 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.73□□□□□ -0.53
Clk1P22518 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clk1P22518 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Clk1P22518 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.73□□□□□ -0.53
Clk1P22518 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clk1P22518 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Gm29127-201ENSMUST00000188304 517 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Clk1P22518 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.73□□□□□ -0.53
Clk1P22518 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clk1P22518 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Clk1P22518 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Clk1P22518 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.72□□□□□ -0.53
Clk1P22518 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clk1P22518 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.72□□□□□ -0.53
Clk1P22518 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Clk1P22518 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clk1P22518 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.72□□□□□ -0.53
Clk1P22518 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clk1P22518 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clk1P22518 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Clk1P22518 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.72□□□□□ -0.53
Clk1P22518 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clk1P22518 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clk1P22518 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clk1P22518 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.72□□□□□ -0.53
Clk1P22518 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.72□□□□□ -0.53
Clk1P22518 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clk1P22518 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clk1P22518 Gm26185-201ENSMUST00000157692 266 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms