Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC26.51■■□□□ 1.83
TOP2AP11388 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC26.51■■□□□ 1.83
TOP2AP11388 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC26.51■■□□□ 1.83
TOP2AP11388 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TOP2AP11388 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 KRT18P36-201ENST00000411618 1276 ntBASIC26.5■■□□□ 1.83
TOP2AP11388 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC26.5■■□□□ 1.83
TOP2AP11388 NOC2LP1-201ENST00000450578 752 ntBASIC26.5■■□□□ 1.83
TOP2AP11388 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 RPS15-202ENST00000585665 467 ntTSL 3 BASIC26.5■■□□□ 1.83
TOP2AP11388 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 NAP1L6-202ENST00000641404 1222 ntBASIC26.5■■□□□ 1.83
TOP2AP11388 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC26.5■■□□□ 1.83
TOP2AP11388 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TOP2AP11388 PES1-204ENST00000402284 2144 ntTSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
TOP2AP11388 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC26.49■■□□□ 1.83
TOP2AP11388 AC006122.1-201ENST00000493323 440 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC26.49■■□□□ 1.83
TOP2AP11388 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC26.49■■□□□ 1.83
TOP2AP11388 MIR3677-201ENST00000578964 60 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
TOP2AP11388 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 AC138894.2-201ENST00000602838 371 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC26.49■■□□□ 1.83
TOP2AP11388 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TOP2AP11388 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC26.49■■□□□ 1.83
TOP2AP11388 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
TOP2AP11388 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC26.49■■□□□ 1.83
TOP2AP11388 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
TOP2AP11388 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 KRT8P21-201ENST00000430398 1491 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 AL157407.1-201ENST00000435784 904 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 MDH2-205ENST00000461263 648 ntTSL 2 BASIC26.49■■□□□ 1.83
TOP2AP11388 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC26.49■■□□□ 1.83
TOP2AP11388 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC26.49■■□□□ 1.83
TOP2AP11388 AC011491.1-203ENST00000637688 543 ntBASIC26.49■■□□□ 1.83
TOP2AP11388 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TOP2AP11388 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TOP2AP11388 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC26.48■■□□□ 1.83
TOP2AP11388 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TOP2AP11388 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC26.48■■□□□ 1.83
TOP2AP11388 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 NME2-201ENST00000393183 568 ntTSL 2 BASIC26.48■■□□□ 1.83
TOP2AP11388 RPSAP31-201ENST00000416648 895 ntBASIC26.48■■□□□ 1.83
TOP2AP11388 AC098935.1-201ENST00000446057 611 ntBASIC26.48■■□□□ 1.83
TOP2AP11388 NDUFS6P1-201ENST00000485187 316 ntBASIC26.48■■□□□ 1.83
TOP2AP11388 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC26.48■■□□□ 1.83
TOP2AP11388 AC008805.1-201ENST00000590892 364 ntBASIC26.48■■□□□ 1.83
TOP2AP11388 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 AC051619.9-201ENST00000623237 597 ntBASIC26.48■■□□□ 1.83
TOP2AP11388 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms