Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.99□□□□□ -0.49
Hcn1O88704 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.99□□□□□ -0.49
Hcn1O88704 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Hcn1O88704 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hcn1O88704 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hcn1O88704 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.98□□□□□ -0.49
Hcn1O88704 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hcn1O88704 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.98□□□□□ -0.49
Hcn1O88704 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.98□□□□□ -0.49
Hcn1O88704 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.98□□□□□ -0.49
Hcn1O88704 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.98□□□□□ -0.49
Hcn1O88704 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hcn1O88704 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hcn1O88704 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hcn1O88704 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hcn1O88704 Gm13392-201ENSMUST00000117708 150 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 Gm17420-201ENSMUST00000164753 153 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Gm37042-201ENSMUST00000193816 581 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 Gm43630-201ENSMUST00000201550 776 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 Gm19163-201ENSMUST00000223313 780 ntBASIC11.97□□□□□ -0.49
Hcn1O88704 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hcn1O88704 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hcn1O88704 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.97□□□□□ -0.49
Hcn1O88704 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms