Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Efnb3O35393 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.88□□□□□ -0.83
Efnb3O35393 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Efnb3O35393 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.87□□□□□ -0.83
Efnb3O35393 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm5687-201ENSMUST00000118252 640 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm14921-201ENSMUST00000118643 908 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm12341-201ENSMUST00000119724 503 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm14760-201ENSMUST00000121831 999 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm8515-201ENSMUST00000194852 576 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Gm18018-201ENSMUST00000198273 408 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm18307-201ENSMUST00000206864 949 ntBASIC9.87□□□□□ -0.83
Efnb3O35393 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.87□□□□□ -0.83
Efnb3O35393 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Efnb3O35393 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Efnb3O35393 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Efnb3O35393 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Efnb3O35393 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.87□□□□□ -0.83
Efnb3O35393 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Efnb3O35393 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.86□□□□□ -0.83
Efnb3O35393 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Efnb3O35393 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Efnb3O35393 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Efnb3O35393 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.86□□□□□ -0.83
Efnb3O35393 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Efnb3O35393 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms