Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gm25214-201ENSMUST00000104573 129 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
MsmbO08540 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.62□□□□□ -0.87
MsmbO08540 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gm11531-201ENSMUST00000117614 555 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.62□□□□□ -0.87
MsmbO08540 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gm27243-201ENSMUST00000183964 521 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.62□□□□□ -0.87
MsmbO08540 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.62□□□□□ -0.87
MsmbO08540 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.62□□□□□ -0.87
MsmbO08540 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.62□□□□□ -0.87
MsmbO08540 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
MsmbO08540 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MsmbO08540 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm10434-201ENSMUST00000101158 471 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm13736-201ENSMUST00000119272 253 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Gm11597-201ENSMUST00000121423 964 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.61□□□□□ -0.87
MsmbO08540 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Gm44364-201ENSMUST00000198368 141 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Gm7783-201ENSMUST00000204795 781 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Gm45925-201ENSMUST00000218882 744 ntBASIC9.61□□□□□ -0.87
MsmbO08540 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.61□□□□□ -0.87
MsmbO08540 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
MsmbO08540 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MsmbO08540 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
MsmbO08540 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms