Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm11814-201ENSMUST00000119515 929 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm27331-201ENSMUST00000183705 60 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm27390-201ENSMUST00000184516 176 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm29705-201ENSMUST00000212598 474 ntBASIC14.7□□□□□ -0.06
Smc3Q9CW03 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smc3Q9CW03 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Gm24231-201ENSMUST00000104315 133 ntBASIC14.69□□□□□ -0.06
Smc3Q9CW03 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smc3Q9CW03 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.68□□□□□ -0.06
Smc3Q9CW03 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.68□□□□□ -0.06
Smc3Q9CW03 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smc3Q9CW03 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms