Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm8913-201ENSMUST00000209491 641 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm45574-201ENSMUST00000210921 331 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.39□□□□□ -0.27
TraipQ8VIG6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TraipQ8VIG6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TraipQ8VIG6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Rps4l-202ENSMUST00000204242 789 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 AC159246.1-201ENSMUST00000214478 249 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm9996-201ENSMUST00000070359 913 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gm26035-201ENSMUST00000083065 308 ntBASIC13.38□□□□□ -0.27
TraipQ8VIG6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TraipQ8VIG6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm14667-201ENSMUST00000119448 1350 ntBASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.37□□□□□ -0.27
TraipQ8VIG6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm27341-201ENSMUST00000183570 106 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms