Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chmp7Q8R1T1 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm9550-201ENSMUST00000161130 862 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm9211-201ENSMUST00000182882 975 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm18038-201ENSMUST00000197900 485 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm9555-201ENSMUST00000200908 583 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm17827-201ENSMUST00000211825 742 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chmp7Q8R1T1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Gm15515-201ENSMUST00000117827 822 ntBASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp7Q8R1T1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp7Q8R1T1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp7Q8R1T1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp7Q8R1T1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp7Q8R1T1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Gm5369-201ENSMUST00000217499 588 ntBASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Matn2-206ENSMUST00000228570 2798 ntBASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp7Q8R1T1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms