Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Gm9083-201ENSMUST00000120423 819 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Gm27390-201ENSMUST00000184516 176 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim9Q8C7M3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Matn2-203ENSMUST00000226766 3252 ntBASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim9Q8C7M3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.77□□□□□ -0.21
Trim9Q8C7M3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim9Q8C7M3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms