Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp6nlQ80XC3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Gm13408-201ENSMUST00000119822 798 ntBASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Gm13935-201ENSMUST00000121859 798 ntBASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp6nlQ80XC3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Gm5051-201ENSMUST00000204085 485 ntBASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp6nlQ80XC3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm19353-201ENSMUST00000184561 445 ntBASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp6nlQ80XC3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms