Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
AtmQ62388 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.53□□□□□ -0.56
AtmQ62388 Gm3329-201ENSMUST00000159873 556 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm9136-201ENSMUST00000193368 454 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.53□□□□□ -0.56
AtmQ62388 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.53□□□□□ -0.56
AtmQ62388 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
AtmQ62388 Gm24231-201ENSMUST00000104315 133 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.53□□□□□ -0.56
AtmQ62388 Gm9797-202ENSMUST00000218003 294 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.53□□□□□ -0.56
AtmQ62388 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AtmQ62388 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AtmQ62388 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.52□□□□□ -0.56
AtmQ62388 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
AtmQ62388 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.52□□□□□ -0.56
AtmQ62388 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.52□□□□□ -0.56
AtmQ62388 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AtmQ62388 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
AtmQ62388 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
AtmQ62388 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
AtmQ62388 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
AtmQ62388 Gm11942-201ENSMUST00000180255 345 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.52□□□□□ -0.57
AtmQ62388 Gm28686-201ENSMUST00000187404 609 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Gm18776-201ENSMUST00000188833 654 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Gm29808-201ENSMUST00000194419 468 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.52□□□□□ -0.57
AtmQ62388 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
AtmQ62388 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
AtmQ62388 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
AtmQ62388 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Gm18801-201ENSMUST00000186616 536 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Gm43854-201ENSMUST00000200418 394 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.51□□□□□ -0.57
AtmQ62388 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.51□□□□□ -0.57
AtmQ62388 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AtmQ62388 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms