Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm13996-201ENSMUST00000118456 430 ntBASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm23119-201ENSMUST00000158610 140 ntBASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm8913-201ENSMUST00000209491 641 ntBASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rc3h1Q4VGL6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm14644-201ENSMUST00000116671 647 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm14028-201ENSMUST00000117434 479 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm9083-201ENSMUST00000120423 819 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm16570-201ENSMUST00000161951 436 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Rprl1-202ENSMUST00000198476 238 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Gm26035-201ENSMUST00000083065 308 ntBASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rc3h1Q4VGL6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rc3h1Q4VGL6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.45□□□□□ -0.1
Rc3h1Q4VGL6 Gm26461-201ENSMUST00000175064 290 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms