Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ctdnep1Q3TP92 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdnep1Q3TP92 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm43118-201ENSMUST00000199149 775 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm44882-201ENSMUST00000205702 802 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm18054-201ENSMUST00000207539 555 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm8227-201ENSMUST00000223306 571 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm10076-201ENSMUST00000073238 384 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdnep1Q3TP92 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.11
Ctdnep1Q3TP92 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ctdnep1Q3TP92 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdnep1Q3TP92 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms