Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm37648-201ENSMUST00000192072 2563 ntBASIC15.64■□□□□ 0.09
Nkx2-3P97334 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm15595-201ENSMUST00000120840 961 ntBASIC15.64■□□□□ 0.09
Nkx2-3P97334 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm17391-201ENSMUST00000171036 126 ntBASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.64■□□□□ 0.09
Nkx2-3P97334 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-3P97334 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.63■□□□□ 0.09
Nkx2-3P97334 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-3P97334 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.63■□□□□ 0.09
Nkx2-3P97334 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm12857-201ENSMUST00000117678 592 ntBASIC15.62■□□□□ 0.09
Nkx2-3P97334 Gm14247-201ENSMUST00000120950 237 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms