Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.24□□□□□ -0.13
Psmc4P54775 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Psmc4P54775 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.24□□□□□ -0.13
Psmc4P54775 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Psmc4P54775 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Psmc4P54775 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Psmc4P54775 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.23□□□□□ -0.13
Psmc4P54775 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.23□□□□□ -0.13
Psmc4P54775 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Psmc4P54775 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.23□□□□□ -0.13
Psmc4P54775 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.23□□□□□ -0.13
Psmc4P54775 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Psmc4P54775 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Psmc4P54775 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Psmc4P54775 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.22□□□□□ -0.13
Psmc4P54775 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Psmc4P54775 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm14058-201ENSMUST00000116082 735 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Gm14644-201ENSMUST00000116671 647 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Psmc4P54775 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm16296-201ENSMUST00000159905 325 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Gm7600-201ENSMUST00000209657 785 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Psmc4P54775 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Psmc4P54775 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.22□□□□□ -0.13
Psmc4P54775 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Psmc4P54775 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.22□□□□□ -0.13
Psmc4P54775 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Psmc4P54775 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Psmc4P54775 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms