Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Gm14208-201ENSMUST00000119645 678 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Gm11637-201ENSMUST00000120601 592 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Gm12403-201ENSMUST00000121384 959 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Gm13316-201ENSMUST00000140537 691 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Gm9550-201ENSMUST00000161130 862 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.03□□□□□ -0.48
Sox3P53784 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Gm45118-201ENSMUST00000208928 825 ntBASIC12.03□□□□□ -0.48
Sox3P53784 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Sox3P53784 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.02□□□□□ -0.48
Sox3P53784 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox3P53784 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Sox3P53784 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Sox3P53784 Gm26956-201ENSMUST00000182176 986 ntBASIC12.02□□□□□ -0.49
Sox3P53784 AA914427-201ENSMUST00000193194 1166 ntBASIC12.02□□□□□ -0.49
Sox3P53784 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox3P53784 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.02□□□□□ -0.49
Sox3P53784 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.02□□□□□ -0.49
Sox3P53784 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.02□□□□□ -0.49
Sox3P53784 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.02□□□□□ -0.49
Sox3P53784 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.02□□□□□ -0.49
Sox3P53784 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sox3P53784 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox3P53784 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sox3P53784 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
Sox3P53784 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox3P53784 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox3P53784 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox3P53784 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox3P53784 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox3P53784 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms