Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.89□□□□□ -0.35
Nfkb1P25799 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nfkb1P25799 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nfkb1P25799 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm24990-201ENSMUST00000157406 323 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm26461-201ENSMUST00000175064 290 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm2260-201ENSMUST00000184965 657 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nfkb1P25799 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.88□□□□□ -0.35
Nfkb1P25799 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nfkb1P25799 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.87□□□□□ -0.35
Nfkb1P25799 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 Mir3102-201ENSMUST00000175555 104 ntBASIC12.87□□□□□ -0.35
Nfkb1P25799 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nfkb1P25799 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Gm10076-201ENSMUST00000073238 384 ntBASIC12.87□□□□□ -0.35
Nfkb1P25799 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nfkb1P25799 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms