Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm15823-201ENSMUST00000064305 670 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Snord83b-201ENSMUST00000104546 94 ntBASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Gm17208-201ENSMUST00000168388 535 ntBASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp5Q9D7S9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm10156-201ENSMUST00000122364 462 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm37042-201ENSMUST00000193816 581 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm37922-201ENSMUST00000195596 455 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp5Q9D7S9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm42599-201ENSMUST00000201308 469 ntBASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm45668-201ENSMUST00000211271 493 ntBASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp5Q9D7S9 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms