Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm12015-201ENSMUST00000117065 843 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm14585-201ENSMUST00000120713 634 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm7985-201ENSMUST00000183329 981 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Mir6973a-201ENSMUST00000183646 78 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Mir6941-201ENSMUST00000184711 59 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13□□□□□ -0.33
Col25a1Q99MQ5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col25a1Q99MQ5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col25a1Q99MQ5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gm13286-201ENSMUST00000117750 537 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gm18059-201ENSMUST00000208073 580 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Gm22058-201ENSMUST00000083393 310 ntBASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col25a1Q99MQ5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms