Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.03□□□□□ -0.64
Scrt1Q99M85 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.03□□□□□ -0.64
Scrt1Q99M85 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Scrt1Q99M85 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12616-201ENSMUST00000118594 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm14109-201ENSMUST00000118814 309 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12624-201ENSMUST00000177615 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12621-201ENSMUST00000177760 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12615-201ENSMUST00000177970 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12622-201ENSMUST00000177975 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12627-201ENSMUST00000178412 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12625-201ENSMUST00000179122 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12614-201ENSMUST00000179586 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm12613-201ENSMUST00000180323 382 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm3508-201ENSMUST00000186012 792 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.02□□□□□ -0.65
Scrt1Q99M85 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scrt1Q99M85 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Paupar-201ENSMUST00000194826 3482 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms