Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcc1Q99LI2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clcc1Q99LI2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clcc1Q99LI2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.4□□□□□ -0.42
Clcc1Q99LI2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Clcc1Q99LI2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.4□□□□□ -0.43
Clcc1Q99LI2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.4□□□□□ -0.43
Clcc1Q99LI2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm38317-201ENSMUST00000195564 343 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Gm5363-201ENSMUST00000211927 938 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcc1Q99LI2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcc1Q99LI2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms