Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm38092-201ENSMUST00000195600 653 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm19184-201ENSMUST00000196798 928 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm35960-201ENSMUST00000202712 767 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdlim5Q8CI51 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdlim5Q8CI51 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pdlim5Q8CI51 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.51□□□□□ -0.57
Pdlim5Q8CI51 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms