Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa4Q8CA71 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm5523-201ENSMUST00000180415 997 ntBASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm3096-201ENSMUST00000185770 364 ntBASIC14.49□□□□□ -0.09
Shisa4Q8CA71 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shisa4Q8CA71 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Mir7032-201ENSMUST00000185154 79 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa4Q8CA71 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Gm6963-201ENSMUST00000147879 379 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Gm44882-201ENSMUST00000205702 802 ntBASIC14.47□□□□□ -0.09
Shisa4Q8CA71 Gm44967-201ENSMUST00000207047 631 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms