Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.83□□□□□ -0.35
Sfr1Q8BP27 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Sfr1Q8BP27 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.83□□□□□ -0.35
Sfr1Q8BP27 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sfr1Q8BP27 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Mir1247-201ENSMUST00000116706 82 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm38092-201ENSMUST00000195600 653 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm42693-201ENSMUST00000196779 631 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm18054-201ENSMUST00000207539 555 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sfr1Q8BP27 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Gm6023-201ENSMUST00000118217 606 ntBASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sfr1Q8BP27 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms