Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm45398-201ENSMUST00000210561 165 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm6867-201ENSMUST00000219165 425 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Ginm1-202ENSMUST00000065124 300 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Gm21811-201ENSMUST00000096485 930 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Mir6998-201ENSMUST00000183343 64 ntBASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm19187-201ENSMUST00000206781 892 ntBASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc85bQ6PDY0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Gm28882-201ENSMUST00000185504 314 ntBASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Gm7902-201ENSMUST00000198842 947 ntBASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Ccdc85bQ6PDY0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms