Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ParpbpQ6IRT3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ParpbpQ6IRT3 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Gm5370-201ENSMUST00000187187 574 ntBASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ParpbpQ6IRT3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 158.4 ms