Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Upk2P38575 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Upk2P38575 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Gm13315-201ENSMUST00000120376 991 ntBASIC10.99□□□□□ -0.65
Upk2P38575 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.99□□□□□ -0.65
Upk2P38575 Gm27243-201ENSMUST00000183964 521 ntBASIC10.99□□□□□ -0.65
Upk2P38575 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.99□□□□□ -0.65
Upk2P38575 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Upk2P38575 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Upk2P38575 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.99□□□□□ -0.65
Upk2P38575 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.99□□□□□ -0.65
Upk2P38575 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Upk2P38575 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.98□□□□□ -0.65
Upk2P38575 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Gm11425-201ENSMUST00000119608 498 ntBASIC10.98□□□□□ -0.65
Upk2P38575 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.98□□□□□ -0.65
Upk2P38575 Mir1982-201ENSMUST00000157368 74 ntBASIC10.98□□□□□ -0.65
Upk2P38575 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Upk2P38575 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.98□□□□□ -0.65
Upk2P38575 Gm6007-201ENSMUST00000208170 823 ntBASIC10.98□□□□□ -0.65
Upk2P38575 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.98□□□□□ -0.65
Upk2P38575 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Upk2P38575 Gm9396-201ENSMUST00000076703 567 ntBASIC10.98□□□□□ -0.65
Upk2P38575 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Upk2P38575 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.98□□□□□ -0.65
Upk2P38575 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Upk2P38575 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.98□□□□□ -0.65
Upk2P38575 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Upk2P38575 Gm13736-201ENSMUST00000119272 253 ntBASIC10.97□□□□□ -0.65
Upk2P38575 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk2P38575 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Gm27514-201ENSMUST00000183692 110 ntBASIC10.97□□□□□ -0.65
Upk2P38575 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Gm18304-201ENSMUST00000189162 546 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms