Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Gm8805-201ENSMUST00000117848 313 ntBASIC12.05□□□□□ -0.48
BdnfP21237 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Gm12291-201ENSMUST00000121627 311 ntBASIC12.05□□□□□ -0.48
BdnfP21237 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Gm45384-201ENSMUST00000210451 277 ntBASIC12.05□□□□□ -0.48
BdnfP21237 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
BdnfP21237 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.05□□□□□ -0.48
BdnfP21237 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.05□□□□□ -0.48
BdnfP21237 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.05□□□□□ -0.48
BdnfP21237 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BdnfP21237 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.04□□□□□ -0.48
BdnfP21237 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BdnfP21237 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.04□□□□□ -0.48
BdnfP21237 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.04□□□□□ -0.48
BdnfP21237 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BdnfP21237 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BdnfP21237 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.03□□□□□ -0.48
BdnfP21237 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BdnfP21237 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms