Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.75□□□□□ -0.53
Nid1P10493 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nid1P10493 Pck2-205ENSMUST00000226352 2784 ntBASIC11.75□□□□□ -0.53
Nid1P10493 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.75□□□□□ -0.53
Nid1P10493 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Nid1P10493 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nid1P10493 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nid1P10493 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nid1P10493 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nid1P10493 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Gm11591-201ENSMUST00000120063 702 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Gm13315-201ENSMUST00000120376 991 ntBASIC11.74□□□□□ -0.53
Nid1P10493 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nid1P10493 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.74□□□□□ -0.53
Nid1P10493 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.74□□□□□ -0.53
Nid1P10493 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Nid1P10493 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.74□□□□□ -0.53
Nid1P10493 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nid1P10493 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nid1P10493 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nid1P10493 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.74□□□□□ -0.53
Nid1P10493 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.74□□□□□ -0.53
Nid1P10493 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nid1P10493 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.73□□□□□ -0.53
Nid1P10493 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.73□□□□□ -0.53
Nid1P10493 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.73□□□□□ -0.53
Nid1P10493 Gm23119-201ENSMUST00000158610 140 ntBASIC11.73□□□□□ -0.53
Nid1P10493 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Gm18304-201ENSMUST00000189162 546 ntBASIC11.73□□□□□ -0.53
Nid1P10493 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.73□□□□□ -0.53
Nid1P10493 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Nid1P10493 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.73□□□□□ -0.53
Nid1P10493 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nid1P10493 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms