Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.49□□□□□ -0.57
P01852 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.49□□□□□ -0.57
P01852 Olfr284-202ENSMUST00000206647 966 ntBASIC11.49□□□□□ -0.57
P01852 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.49□□□□□ -0.57
P01852 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
P01852 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.49□□□□□ -0.57
P01852 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
P01852 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.48□□□□□ -0.57
P01852 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01852 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01852 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P01852 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.48□□□□□ -0.57
P01852 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.48□□□□□ -0.57
P01852 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm27501-201ENSMUST00000183599 107 ntBASIC11.48□□□□□ -0.57
P01852 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm38158-201ENSMUST00000194617 339 ntBASIC11.48□□□□□ -0.57
P01852 Gm18935-201ENSMUST00000212692 664 ntBASIC11.48□□□□□ -0.57
P01852 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01852 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P01852 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
P01852 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.48□□□□□ -0.57
P01852 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.48□□□□□ -0.57
P01852 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01852 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.47□□□□□ -0.57
P01852 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.47□□□□□ -0.57
P01852 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01852 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms