Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Rnf13O54965 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.36□□□□□ -0.59
Rnf13O54965 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf13O54965 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf13O54965 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf13O54965 Map1b-203ENSMUST00000223725 2669 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf13O54965 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Gm12859-201ENSMUST00000117834 427 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf13O54965 Gm14704-201ENSMUST00000120300 874 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 Gm14760-201ENSMUST00000121831 999 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf13O54965 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf13O54965 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Gm10576-201ENSMUST00000191927 825 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.35□□□□□ -0.59
Rnf13O54965 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf13O54965 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf13O54965 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf13O54965 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf13O54965 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf13O54965 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.34□□□□□ -0.59
Rnf13O54965 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rnf13O54965 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.34□□□□□ -0.59
Rnf13O54965 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.34□□□□□ -0.59
Rnf13O54965 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.34□□□□□ -0.59
Rnf13O54965 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf13O54965 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf13O54965 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf13O54965 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rnf13O54965 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf13O54965 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf13O54965 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms