Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Mir877-201ENSMUST00000104738 85 ntBASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Gm12015-201ENSMUST00000117065 843 ntBASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb9E9Q5G2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb9E9Q5G2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb9E9Q5G2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb9E9Q5G2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb9E9Q5G2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb9E9Q5G2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm14644-201ENSMUST00000116671 647 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm15808-201ENSMUST00000119046 604 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm15276-201ENSMUST00000145953 498 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Gm5070-201ENSMUST00000177599 862 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb9E9Q5G2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms