Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Daam2-202ENSMUST00000224595 1926 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm7809-201ENSMUST00000153199 742 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm16379-201ENSMUST00000161469 348 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm8762-201ENSMUST00000193486 339 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm19184-201ENSMUST00000196798 928 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb2S4R1M3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
H2afb2S4R1M3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms