Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm15653-201ENSMUST00000119247 907 ntBASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm45612-201ENSMUST00000211320 160 ntBASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 AC131710.1-201ENSMUST00000228336 990 ntBASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rpl39lQ9CQD0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm9103-201ENSMUST00000119371 405 ntBASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Mir8117-201ENSMUST00000184773 107 ntBASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm29541-201ENSMUST00000191351 678 ntBASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm38144-201ENSMUST00000192790 465 ntBASIC8.13□□□□□ -1.11
Rpl39lQ9CQD0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms