Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm27847-201ENSMUST00000183711 107 ntBASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm27375-201ENSMUST00000183799 107 ntBASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Gm12138-201ENSMUST00000122180 951 ntBASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Gm9794-201ENSMUST00000202370 423 ntBASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb1Q9CQ70 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb1Q9CQ70 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms