Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Trps1Q925H1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trps1Q925H1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13□□□□□ -0.33
Trps1Q925H1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13□□□□□ -0.33
Trps1Q925H1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13□□□□□ -0.33
Trps1Q925H1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13□□□□□ -0.33
Trps1Q925H1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trps1Q925H1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trps1Q925H1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.99□□□□□ -0.33
Trps1Q925H1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.99□□□□□ -0.33
Trps1Q925H1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Gm12957-201ENSMUST00000117835 377 ntBASIC12.99□□□□□ -0.33
Trps1Q925H1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.99□□□□□ -0.33
Trps1Q925H1 Gm39404-201ENSMUST00000216350 313 ntBASIC12.99□□□□□ -0.33
Trps1Q925H1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trps1Q925H1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trps1Q925H1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.98□□□□□ -0.33
Trps1Q925H1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.98□□□□□ -0.33
Trps1Q925H1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.98□□□□□ -0.33
Trps1Q925H1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trps1Q925H1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trps1Q925H1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms