Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm23085-201ENSMUST00000157849 293 ntBASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.16□□□□□ -0.14
Syne4Q8CII8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm9132-201ENSMUST00000210182 832 ntBASIC14.16□□□□□ -0.14
Syne4Q8CII8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm15573-201ENSMUST00000119487 540 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm10774-201ENSMUST00000188689 204 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Mir7686-201ENSMUST00000200604 57 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.15□□□□□ -0.14
Syne4Q8CII8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.15□□□□□ -0.14
Syne4Q8CII8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm24231-201ENSMUST00000104315 133 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm8100-201ENSMUST00000182906 988 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm45398-201ENSMUST00000210561 165 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.14□□□□□ -0.15
Syne4Q8CII8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Syne4Q8CII8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms