Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm5279-201ENSMUST00000199575 745 ntBASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tsen54Q8C2A2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm5354-201ENSMUST00000182417 973 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm27772-201ENSMUST00000184900 187 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm28631-201ENSMUST00000190740 334 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tsen54Q8C2A2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms