Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm15573-201ENSMUST00000119487 540 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85bQ6PDY0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm11801-201ENSMUST00000117807 746 ntBASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm12501-201ENSMUST00000119163 529 ntBASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm15881-201ENSMUST00000148792 942 ntBASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85bQ6PDY0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc85bQ6PDY0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc85bQ6PDY0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc85bQ6PDY0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms