Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm14704-201ENSMUST00000120300 874 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm15429-201ENSMUST00000151268 798 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm42599-201ENSMUST00000201308 469 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm18473-201ENSMUST00000220543 868 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43aQ3TL54 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm12138-201ENSMUST00000122180 951 ntBASIC13.3□□□□□ -0.28
Trim43aQ3TL54 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms