Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.71■□□□□ 0.11
Nkx2-3P97334 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Nkx2-3P97334 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.71■□□□□ 0.1
Nkx2-3P97334 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-3P97334 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.71■□□□□ 0.1
Nkx2-3P97334 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.71■□□□□ 0.1
Nkx2-3P97334 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.71■□□□□ 0.1
Nkx2-3P97334 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gm11667-201ENSMUST00000119828 486 ntBASIC15.7■□□□□ 0.1
Nkx2-3P97334 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gm2594-201ENSMUST00000214774 742 ntBASIC15.7■□□□□ 0.1
Nkx2-3P97334 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.7■□□□□ 0.1
Nkx2-3P97334 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-3P97334 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm11941-201ENSMUST00000119904 610 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm15432-201ENSMUST00000121106 195 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.69■□□□□ 0.1
Nkx2-3P97334 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-3P97334 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-3P97334 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm3508-201ENSMUST00000186012 792 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm4482-201ENSMUST00000200876 742 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms