Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim43bP86448 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim43bP86448 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.95□□□□□ -0.34
Trim43bP86448 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43bP86448 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.95□□□□□ -0.34
Trim43bP86448 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim43bP86448 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Gm9899-201ENSMUST00000065519 555 ntBASIC12.95□□□□□ -0.34
Trim43bP86448 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim43bP86448 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.95□□□□□ -0.34
Trim43bP86448 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim43bP86448 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm22331-201ENSMUST00000158066 136 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim43bP86448 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm29608-201ENSMUST00000190444 463 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trim43bP86448 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim43bP86448 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim43bP86448 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim43bP86448 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim43bP86448 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.94□□□□□ -0.34
Trim43bP86448 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim43bP86448 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.93□□□□□ -0.34
Trim43bP86448 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim43bP86448 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim43bP86448 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Trim43bP86448 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim43bP86448 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim43bP86448 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Gm27731-201ENSMUST00000185192 107 ntBASIC12.93□□□□□ -0.34
Trim43bP86448 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim43bP86448 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.93□□□□□ -0.34
Trim43bP86448 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.93□□□□□ -0.34
Trim43bP86448 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.93□□□□□ -0.34
Trim43bP86448 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim43bP86448 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trim43bP86448 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms