Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Foxa1P35582 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Foxa1P35582 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Foxa1P35582 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Foxa1P35582 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm24231-201ENSMUST00000104315 133 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Gm13736-201ENSMUST00000119272 253 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Gm13315-201ENSMUST00000120376 991 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.61□□□□□ -0.55
Foxa1P35582 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm43630-201ENSMUST00000201550 776 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm6013-201ENSMUST00000212264 699 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Gm10608-202ENSMUST00000213924 676 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Foxa1P35582 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.61□□□□□ -0.55
Foxa1P35582 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Foxa1P35582 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 Gm10434-201ENSMUST00000101158 471 ntBASIC11.6□□□□□ -0.55
Foxa1P35582 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.6□□□□□ -0.55
Foxa1P35582 Gm14760-201ENSMUST00000121831 999 ntBASIC11.6□□□□□ -0.55
Foxa1P35582 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.6□□□□□ -0.55
Foxa1P35582 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Mospd4-201ENSMUST00000180618 576 ntBASIC11.6□□□□□ -0.55
Foxa1P35582 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.6□□□□□ -0.55
Foxa1P35582 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Foxa1P35582 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Foxa1P35582 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Foxa1P35582 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms